"Does the Honda CR-V have a manual transmission?"
Honda hasn't offered a manual transmission on the CR-V since the 2006 model year. Starting in 2007, all models have come with a standard five-speed automatic transmission.
Several compact and midsize SUVs are available with a manual transmission (most only with front-wheel drive), including the Hyundai Tucson, Jeep Compass and Patriot, Kia Sportage, Mazda CX-5 and Subaru Forester.
If a stick shift is a must-have feature then you should use the Cars.com Vehicle Recommender, here , which lets you choose vehicles by transmission type, drive wheels, price and major features.
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